Browse of TCMCG016C26719 protein

CDS

Accession Number	TCMCG016C26719
gbkey	CDS
Protein Id	OMO53823.1
Location	join(20113..20377,20976..21018,21337..21397,21488..21622,21920..21975,23836..24257,25388..25483,29833..29994,31119..31343,31484..31741,32033..32217,32300..32497,32929..33105,33223..33608,34193..34373,34659..34781,34875..34991,35217..35321,35605..35745,35836..35901,36154..36312,36588..36669,36762..36814)
Organism	Corchorus capsularis
locus_tag	CCACVL1_28313

Protein

Length	1231aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01015130.1
Definition	hypothetical protein CCACVL1_28313 [Corchorus capsularis]
Locus_tag	CCACVL1_28313

EGGNOG-MAPPER Annotation

COG_category	A
Description	DEAD-box ATP-dependent RNA helicase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14805        [VIEW IN KEGG]
EC	3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003724        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004004        [VIEW IN EMBL-EBI] GO:0004386        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008026        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008186        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010501        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070035        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCGTCTCTCTCAACCAAAACCCGCATCCGCGGCGTCGTTTTCGACATGGACGGCACCCTTACTGTTCCCGTCATCGACTTCGCCGCAATGTACAAGGCCGTCCTTGGAGATGACGAGTACAAGCGAATCCGAGCTGAAAACCCTTCTGGGATTGATATCTTGCACCACATTGAGAATTGGAGTCCCGATAAGCAGCGCCGAGCTTATCAGGTTATTGCTGATTACGAAAAACAGGGCCTTGATCGCCTCCAAATCATGCCTGGTGCAGCAGAACTTTGTGGTTTTCTTGATGCAAAGAAAATAAGAAGGGGACTAATCACTCGCAATGTGAAAGAAGCTGTTGATCTGTTTCATCAACGGTTTGGGATTATGTTTTCTCCAGCACTCAGCAGGGAGTTTCGTCCTTATAAACCAGACCCTGCTCCTCTGCTACATATCTGTACAACTTGGGAAGTTCAACCAAATGAAGTCATGATGGTTGGTGATAGTCTAAAAGATGATGTGGTTTGTGGGAAAAGAGCAGGAGCTCTGACCTGCTTGCTTGATGAAAAGGGGAGGTCTTCCCAGCAACATAATAACCATAATCATAATCCTCTTAATAGCAGAAATACAATTAAAAATGACATAAAACCAAAAACCCAACTCATAAATTTAGTTGCAAGCCCTGCTTCTGGTGAGGTTTCTGTCAGGAAAGGGTTGAAAAGCAAGGCAAATGAGGAGAAGAAAAGTTTATCCCAAGAAGGTTTTCAAGAAATGTTGGCTTTGTGTGGATTGGGATATTGGATGCAGGGTTTTAGGTGTTTTCCATGGTTGGCTTTGAATTTTCACATGGCTTATAATCTTAACTTGAATCCTTCAACATTGCAACTTGTGCAGAATTCTGGTAACCTTCCCATGGTTGCTAAGCCTCTCTATGGAATTCTCTCTGATGTTCTTTACATTTGGGGTGCTCATAGAATACCATATATTTCCATTGGAGGGCAAGCCCTTCCAACCCTCATGGCATGTGTTCTTCTCAGTAATCTTGGGGCATCCATTACAGAAGTTGCAAAGGACGCTCTCGTGGCAGAGTATGAGAAAGAAGATGGGTTGGCTTCGTTAGAGATAATAGGAAGAGGAGGAGGATGTGGGGAAGTTTACAAGGCAGAGTTACCAGGAAGCGGTGGGATCATGATTGCTATTAAGAAGATTATTATTCAGCGTCCAATAGATGCAGACGAATTGACTGATGAAGATCTTCAAGGACAAAGGAAAGCTTCAGAGCCCATGGCCGCTTTGCCACCGCCGCAACAAAAACAAGAAGATTCAGTTTCAATTTCGAAGAAGAAAAAGCAGAAGAGAAAGAGAACGAAACATGACCCAGAACTCGACCGGCTCGACTCGCTCCCTTGGAACTCTTCTCTCCCCGATAAAGAAGATGAAAATTTCTCCCTCTTTGTCGGCTCCGGCGACCTCGATGGAGGTTTTCTTTCCCTTGAAGAGATTGACGAAGCTGATTATAGTTTAGACGTACCTGGAATTAAGAAGAAAACATCTGATAAGAAATCAAAATCGAAGAAGCAGAAGCTTAGTGAAGTCAGTGAGGGTTCTGCTGAAGATGTTGAAGCAGAACCTGCTGATGCAATGGCAGAAGAGAAGAATGTGAAGGCCAAAAAGAAGAAAAAGAAGAGTAAGAAGAGAAAGGAAAAGAAAACTGAACAAGAGAAGGAGGCTGCAACTGTTAGTGACAACAAAGATGATGATGAAGAAGAGATGCTTGATGAGGCTGATGCTTCCTCTGAATTTTATGCATGGAGTGAGTTGAGACTTCATCCTCTTCTTATGAAATCAATATCTCGGCTTGGGTTCAAGGAACCTACTCCAATACAGAAAGCTTGTATTCCTGCTGCAGCTCATCAGGGGAAGGATGTTATTGGTGCTGCTGAGACGGGATCTGGAAAAACACTTGCTTTCGGCCTCCCTATTCTCCAACGTCTTTTAGAAGAAGAGGAAAAAGCTGCGACGAAAATGCTTGAGCAGAAGGGGGATGAAGCAGGAAATTATGCTCCAAAAGGTGTTTTACGAGCTCTTATCATTACTCCTACCAGGGAACTTGCCCTCCAGGTTACTGATCATCTCAAGGAAGTTGCCAAGGGTATCAATGTTAGAGTGGTTCCTATAGTTGGTGGCATGTCTGCAGAGAAGCAGGAACGATTATTAAAAACAAGGCCTGAGATCATTGTTGGAACTCCAGGCAGATTATGGGAGCTTATTTCAGACGGTGAAAAACATCTTACTGAGTTACATTCATTGTCTTTCTTTGTGCTGGATGAGGCTGATCGAATGGTTGAAGGAGGACATTTCCGTGAGTTACAGTCAATAATTGATTTGCTTCCTATGACCAATGGTGTCAGCCAAGAACAATCTCAAAACACACAGAATTGTGTGACTGTTTCAAGCTTATCAAGAAAGAAAAGACAAACATTTGTTTTCTCTGCAACTTTAGCACTCTCTGCTGATTTCCGGAAGAAGCTAAAGCGTGGTTCATTAAAGTCCAAGCAGTCTGCTGAGGGTTTGAATTCTATTGAGATTCTATCTGAGCGAGCAGGAATGAGACCCAATGCTGCCATTATTGATCTGACAAATGCATCAATTTTAGCAAAGAACCTCGAAGAATCTTTTATTGAATGCAGGGAAGAAGATAAAGATGCTTACTTGTATTACATTTTGAGTGTCCATGGAGAAGGGCGAACAATTGTTTTCTGTACATCAATTGCAGCTTTGCGTCATATTTCTTCACATTTGCGCATCCTTGGCATAAATGTATCAACACTTCATGCTCAGATGCAGCAGAGAGCTCGCTTGAAGGCCATGGACCGGTTTCGTGCAAATGAACATGGTATTCTTGTTGCCACTGATGTTGCAGCAAGGGGGCTTGATATTCCTGGTGTTCGGACTGTTGTCCACTATCAGCTTCCTCATTCAGCAGAAGTTTATGTACACAGAAGTGGAAGAACTGCTAGGGCTTCTGCTGAGGGATGCAGCATTGCTCTTATCTCTCCAAATGATTCTGCAAAGTTTGCTTCTCTCTGTAAATCATTTTCCAAGGAAAGCATCAGACGGTTTCCTTTAGAGAACTCATACTTGCCAGAGGTCATGAAACGTGTATCCCTTGCACGTCAAATAGACAAGATCTTGCGGAAGGACTCCCAGGAAAGGGCAAATAAAAGCTGGTTGGAGCGGAGTGCAGAGTCATTAGAATTAGTAATGGACAACTATGACAGTGAGGAGGAAAGAGTGAAGAATATTAAGCAAAAGAAAGCCAGCTCCACGCAATTAAAGAAGTTACAGCAGGAGCTCAGTTCAATGCTTTCACAGCCACTGTGTCCAAAAACTTTTTCACATCGCTATCCAGCTGCAGGTGGTGTTACACATCTTATACAAAATCAATTTGAAGAATTGGCTAAGCAAAATGTAGACAGCAACTTAGCTTCAGGTGAAAACAAGAGAAGGAAGATGGTTGTTATTGGTCAAGATTGCCTGGAACCACTCCAAGCACTTCGGAATGCTGGTCGCGAGGTGCACCTTGATATAAAAGAGATGGCTGAAAAGCGAAGAAATGTGGAGAGTTTGAGGAGAAAAAGAAAAGAGGAGAAGAAACGTTTGCGTGACCAGCGCAGAAAGCAGAAGAAAAATTTGCAAGGGAGACAGTGA

Protein:   MSSLSTKTRIRGVVFDMDGTLTVPVIDFAAMYKAVLGDDEYKRIRAENPSGIDILHHIENWSPDKQRRAYQVIADYEKQGLDRLQIMPGAAELCGFLDAKKIRRGLITRNVKEAVDLFHQRFGIMFSPALSREFRPYKPDPAPLLHICTTWEVQPNEVMMVGDSLKDDVVCGKRAGALTCLLDEKGRSSQQHNNHNHNPLNSRNTIKNDIKPKTQLINLVASPASGEVSVRKGLKSKANEEKKSLSQEGFQEMLALCGLGYWMQGFRCFPWLALNFHMAYNLNLNPSTLQLVQNSGNLPMVAKPLYGILSDVLYIWGAHRIPYISIGGQALPTLMACVLLSNLGASITEVAKDALVAEYEKEDGLASLEIIGRGGGCGEVYKAELPGSGGIMIAIKKIIIQRPIDADELTDEDLQGQRKASEPMAALPPPQQKQEDSVSISKKKKQKRKRTKHDPELDRLDSLPWNSSLPDKEDENFSLFVGSGDLDGGFLSLEEIDEADYSLDVPGIKKKTSDKKSKSKKQKLSEVSEGSAEDVEAEPADAMAEEKNVKAKKKKKKSKKRKEKKTEQEKEAATVSDNKDDDEEEMLDEADASSEFYAWSELRLHPLLMKSISRLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEEEKAATKMLEQKGDEAGNYAPKGVLRALIITPTRELALQVTDHLKEVAKGINVRVVPIVGGMSAEKQERLLKTRPEIIVGTPGRLWELISDGEKHLTELHSLSFFVLDEADRMVEGGHFRELQSIIDLLPMTNGVSQEQSQNTQNCVTVSSLSRKKRQTFVFSATLALSADFRKKLKRGSLKSKQSAEGLNSIEILSERAGMRPNAAIIDLTNASILAKNLEESFIECREEDKDAYLYYILSVHGEGRTIVFCTSIAALRHISSHLRILGINVSTLHAQMQQRARLKAMDRFRANEHGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPNDSAKFASLCKSFSKESIRRFPLENSYLPEVMKRVSLARQIDKILRKDSQERANKSWLERSAESLELVMDNYDSEEERVKNIKQKKASSTQLKKLQQELSSMLSQPLCPKTFSHRYPAAGGVTHLIQNQFEELAKQNVDSNLASGENKRRKMVVIGQDCLEPLQALRNAGREVHLDIKEMAEKRRNVESLRRKRKEEKKRLRDQRRKQKKNLQGRQ